Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 191 a.a., NADH:quinone oxidoreductase subunit RnfA (Shelley Haveman) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 58.9 bits (141), Expect = 6e-14
 Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 23/197 (11%)

Query: 12  LAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIRNHIPNS-- 69
           ++ +  NN +  Q LG C  L  + +   A  M  AV+FV  ++     LI+ H+     
Sbjct: 8   ISAIFVNNIVLAQYLGNCPYLGCSREKGVALGMGAAVVFVIIMATLCTWLIQYHVLVPFD 67

Query: 70  ---VRIIVQMAIIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVMGRAEAFAMKS- 125
              ++ IV + +IA LV  V+  LK  +  +   L +F+ LI TNC VMG       +  
Sbjct: 68  LAYLQTIVFILVIAGLVQFVEMFLKKMVPPLYAALGIFLPLITTNCAVMGVTILVQREEY 127

Query: 126 EPIPSFIDGIGNGLGYGFVLMTVGFFRELLGSGKLFGLEVLPLISNGGWYQPNGLMLLAP 185
           + + S   G+ + LG+   L+ +   RE L + ++                P   M+  P
Sbjct: 128 DLMTSLTYGLASSLGFVLALLLMAGIRERLDTARV----------------PKA-MIGTP 170

Query: 186 SAFFLIGFMIWAIRTFK 202
            A  + G M  A   FK
Sbjct: 171 IALIMAGLMSLAFMAFK 187