Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 223 a.a., NADH:quinone oxidoreductase subunit RnfE (Shelley Haveman) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  154 bits (388), Expect = 2e-42
 Identities = 85/187 (45%), Positives = 115/187 (61%), Gaps = 9/187 (4%)

Query: 25  VLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIRNHIPNSVRIIVQMAIIASLVI 84
           VLG+C  LAVT        M LAV+FV ALSN  +S++RN IP  VRI   +AI ASLV+
Sbjct: 22  VLGLCPTLAVTKTASNGLGMGLAVIFVLALSNMIISMVRNIIPKKVRIACFIAISASLVV 81

Query: 85  VVDQILKAYLYDISKQLSVFVGLIITNCIVMGRAEAFAMKSEPIPSFIDGIGNGLGYGFV 144
            V+ +++AY Y + +QL +FV LI+ NCI++GRAEAFA K+    S  DG+G GLG+   
Sbjct: 82  AVELLMQAYAYPLYQQLGIFVPLIVVNCIILGRAEAFAAKNPVSLSLADGLGIGLGFTLS 141

Query: 145 LMTVGFFRELLGSGKLFGLEVLPLISNGGW--YQPNGLMLLAPSAFFLIGFMIWAIRTFK 202
           L+ +G  REL G+G LFG +V+       W  YQP G+M+ AP AF  +G  + A+    
Sbjct: 142 LVFLGGIRELFGTGMLFGTQVM-------WQGYQPFGIMVEAPGAFICLGLTLAAMNVIN 194

Query: 203 PEQVEAK 209
             Q   K
Sbjct: 195 TWQARRK 201