Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 190 a.a., Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 69.3 bits (168), Expect = 4e-17
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 6/148 (4%)

Query: 12  LAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIRNHIPNS-- 69
           ++ +  NN +  Q LG+C  L V+ K+ETA  M+ AV FV  ++     LI+  + ++  
Sbjct: 8   ISAIFVNNIVLSQFLGICPFLGVSKKVETAMGMSAAVAFVLTIATIVTFLIQKFVLDAFG 67

Query: 70  ---VRIIVQMAIIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVMGRAEAFAMKS- 125
              ++ I  + +IA LV +V+ ILK     + + L VF+ LI TNC ++G A     K  
Sbjct: 68  LGYLQTITFILVIAGLVQMVEIILKKVSPSLYQALGVFLPLITTNCCILGVAILVIQKDF 127

Query: 126 EPIPSFIDGIGNGLGYGFVLMTVGFFRE 153
           + +   +      LG+G  L+     RE
Sbjct: 128 DLLTGVVYAFSTALGFGLALVLFAGLRE 155