Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella sp. ANA-3

 Score =  248 bits (633), Expect = 6e-71
 Identities = 122/202 (60%), Positives = 150/202 (74%)

Query: 1   MSSAKELKKSVLAPVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVS 60
           MS++  ++  +  PV  NNP+A+QVLGVCSALAV+  ++TA VMTLAV FV   SN  +S
Sbjct: 1   MSNSLSMRDMLAGPVFANNPVAMQVLGVCSALAVSNSMQTAVVMTLAVTFVLVFSNLIIS 60

Query: 61  LIRNHIPNSVRIIVQMAIIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVMGRAEA 120
            IRN IPNSVRII QM +IASLVI+VD +L+   Y++SKQLSVFVGLIITNCI+MGRAEA
Sbjct: 61  AIRNFIPNSVRIIAQMTVIASLVIIVDMVLQDVAYELSKQLSVFVGLIITNCIIMGRAEA 120

Query: 121 FAMKSEPIPSFIDGIGNGLGYGFVLMTVGFFRELLGSGKLFGLEVLPLISNGGWYQPNGL 180
           FAMK  P  + +D +GN  GYG VL++V F RELLG+G LFG  VL  + NGGWY PN +
Sbjct: 121 FAMKYPPHLAVVDAVGNAAGYGLVLISVAFVRELLGTGNLFGHSVLTTVENGGWYLPNEM 180

Query: 181 MLLAPSAFFLIGFMIWAIRTFK 202
             L PSAFFLIG +IW I   +
Sbjct: 181 FKLPPSAFFLIGLLIWTINVIQ 202