Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) from Shewanella sp. ANA-3

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 17/157 (10%)

Query: 13  APVLDNNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIRNHI--PNSV 70
           A  LDN  ++   LG+C+ LAV+ K+ TAF + +AV+ V  L+     LI   +  P ++
Sbjct: 11  ATFLDNMALSF-FLGMCTFLAVSKKVSTAFGLGVAVIVVMTLAVPLNQLIYVKVLAPGAL 69

Query: 71  -------------RIIVQMAIIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVMGR 117
                        ++I  + +IA+LV +++  L  Y+  +   L +F+ L+  NC +   
Sbjct: 70  AWAGMPGIDLSYLQLITFIGVIAALVQILEMFLDKYIPSLYDSLGIFLPLLTVNCAIFAG 129

Query: 118 AEAFAMKSEPI-PSFIDGIGNGLGYGFVLMTVGFFRE 153
               A +      S +  +G+G G+   ++ +   RE
Sbjct: 130 VIFMANRDYNFAESAVFAMGSGTGWALAIVMLAGLRE 166