Pairwise Alignments

Query, 210 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit D from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., electron transport complex RsxE subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (327), Expect = 2e-35
 Identities = 77/190 (40%), Positives = 110/190 (57%), Gaps = 16/190 (8%)

Query: 18  NNPIALQVLGVCSALAVTTKLETAFVMTLAVMFVTALSNFFVSLIRNHIPNSVRIIVQMA 77
           NNP  +Q+LG+C  LAVT  L  A  + +A M V   SN  VSL+R+++P  +RI V + 
Sbjct: 15  NNPGLVQLLGLCPLLAVTATLTNALGLGVATMLVLIGSNILVSLVRDYVPKEIRIPVFVM 74

Query: 78  IIASLVIVVDQILKAYLYDISKQLSVFVGLIITNCIVMGRAEAFAMKSEPIPSFIDGIGN 137
           IIA+LV  V  ++ AY Y +   L +F+ LI+TNCI++GRAEAFA ++    +  DG+  
Sbjct: 75  IIAALVTAVQLLINAYAYGLYLSLGIFLPLIVTNCIIIGRAEAFASRNNAFSAAFDGLMM 134

Query: 138 GLGYGFVLMTVGFFRELLGSGKLF-GLEVLPLISNGGWYQ-----------PNGLMLLAP 185
           GLG+  VL  +G  RE+LG G LF G + L     G W +           P  L +L P
Sbjct: 135 GLGFTLVLAVLGATREILGQGTLFDGADQL----LGPWAKALTIQVWQVDTPFLLAMLPP 190

Query: 186 SAFFLIGFMI 195
            AF ++G +I
Sbjct: 191 GAFIVMGLLI 200