Pairwise Alignments

Query, 198 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit E from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., Na(+)-translocating NADH-quinone reductase subunit E (RefSeq) from Shewanella loihica PV-4

 Score =  315 bits (806), Expect = 5e-91
 Identities = 159/202 (78%), Positives = 177/202 (87%), Gaps = 4/202 (1%)

Query: 1   MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGIAVIVVLTISVPVNNLVY 60
           MEHYISLL++S+FIENMALSFFLGMCTFLAVSKKV T+ GLG+AVIVVL ISVPVN ++Y
Sbjct: 1   MEHYISLLIRSVFIENMALSFFLGMCTFLAVSKKVTTAMGLGVAVIVVLAISVPVNQIIY 60

Query: 61  NLVLKPDAL----VEGVDLSFLNFITFIGVIAALVQILEMILDRFFPPLYNALGIFLPLI 116
             +L P AL    V   DLSFL FITFIGVIAALVQILEM LD++FPPLYNALGIFLPLI
Sbjct: 61  QGILAPGALAWAGVPDADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLI 120

Query: 117 TVNCAIFGGVSFMVQRDYSFAESVVYGFGSGVGWMLAIVALAGIREKMKYSDVPPGLRGL 176
           TVNCAIFG VSFMV+RDY+  ES+V+G GSG+GW LAIV LAGIREK+KY+DVP GLRGL
Sbjct: 121 TVNCAIFGAVSFMVERDYNLGESLVFGIGSGIGWALAIVLLAGIREKLKYADVPNGLRGL 180

Query: 177 GITFITAGLMALGFMSFSGVQL 198
           GITF+TAGLMALGFMSFSGV L
Sbjct: 181 GITFVTAGLMALGFMSFSGVSL 202