Pairwise Alignments

Query, 198 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit E from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., Na(+)-translocating NADH-quinone reductase subunit D (RefSeq) from Shewanella loihica PV-4

 Score = 57.8 bits (138), Expect = 1e-13
 Identities = 46/157 (29%), Positives = 80/157 (50%), Gaps = 14/157 (8%)

Query: 7   LLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGIAVIVVLTISVPVNNLVYNLVLKP 66
           +L   IF  N      LG+C+ LAVS  ++T+  + +AV  VL  S  + + + N +  P
Sbjct: 11  ILTGPIFANNPVAMQVLGVCSALAVSNSMQTALVMTLAVTFVLVFSNLIISSIRNFI--P 68

Query: 67  DALVEGVDLSFLNFITFIGVIAALVQILEMILDRFFPPLYNALGIFLPLITVNCAIFG-G 125
           ++         +  I  + VIA+LV I++M+L      L   L +F+ LI  NC I G  
Sbjct: 69  NS---------VRIIAQMTVIASLVIIVDMVLQDVAYELSRQLSVFVGLIITNCIIMGRA 119

Query: 126 VSFMVQRDYSFAESVVYGFGSGVGWMLAIVALAGIRE 162
            +F ++     A  VV   G+ +G+ + ++++A +RE
Sbjct: 120 EAFAMKMPPHLA--VVDAMGNAMGYGVILLSVAFVRE 154



 Score = 22.7 bits (47), Expect = 0.005
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 4   YISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGIAVIVV 48
           ++ L++ +  I   A +F + M   LAV   +  + G G+ ++ V
Sbjct: 105 FVGLIITNCIIMGRAEAFAMKMPPHLAVVDAMGNAMGYGVILLSV 149