Pairwise Alignments

Query, 198 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit E from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., NqrDE/RnfAE family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 78.6 bits (192), Expect = 8e-20
 Identities = 53/162 (32%), Positives = 84/162 (51%), Gaps = 12/162 (7%)

Query: 1   MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGIAVIVVLTISVPVNNLVY 60
           M +Y  +  + ++  N  L   LG+C  LAV+  +  + GLGIA ++VL  S  + +LV 
Sbjct: 1   MTNYREIAWQGLWKNNPGLVQRLGLCPLLAVTTTLTNALGLGIATMLVLIGSNVLISLVR 60

Query: 61  NLVLKPDALVEGVDLSFLNFITFIGVIAALVQILEMILDRFFPPLYNALGIFLPLITVNC 120
           + V K            +    F+ +IAALV  ++++++ +   LY +LGIFLPLI  NC
Sbjct: 61  DYVPKE-----------IRIPVFVMIIAALVTAVQLLVNAYAYGLYMSLGIFLPLIVTNC 109

Query: 121 AIFGGVSFMVQRDYSFAESVVYGFGSGVGWMLAIVALAGIRE 162
            I G       R+ +F+ S   G   G+G+ L +V L   RE
Sbjct: 110 IIIGRAEAFASRNNAFS-SAFDGLMMGLGFTLVLVLLGATRE 150