Pairwise Alignments

Query, 198 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit E from Vibrio cholerae E7946 ATCC 55056

Subject, 190 a.a., Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfA (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  176 bits (445), Expect = 3e-49
 Identities = 92/193 (47%), Positives = 125/193 (64%), Gaps = 6/193 (3%)

Query: 4   YISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGIAVIVVLTISVPVNNLVYNLV 63
           YI + + +IF+ N+ LS FLG+C FL VSKKV+T+ G+  AV  VLTI+  V  L+   V
Sbjct: 3   YILIFISAIFVNNIVLSQFLGICPFLGVSKKVETAMGMSAAVAFVLTIATIVTFLIQKFV 62

Query: 64  LKPDALVEGVDLSFLNFITFIGVIAALVQILEMILDRFFPPLYNALGIFLPLITVNCAIF 123
           L      +   L +L  ITFI VIA LVQ++E+IL +  P LY ALG+FLPLIT NC I 
Sbjct: 63  L------DAFGLGYLQTITFILVIAGLVQMVEIILKKVSPSLYQALGVFLPLITTNCCIL 116

Query: 124 GGVSFMVQRDYSFAESVVYGFGSGVGWMLAIVALAGIREKMKYSDVPPGLRGLGITFITA 183
           G    ++Q+D+     VVY F + +G+ LA+V  AG+RE+M    +P G++G  I  ITA
Sbjct: 117 GVAILVIQKDFDLLTGVVYAFSTALGFGLALVLFAGLREQMTLVKIPKGMQGTPIALITA 176

Query: 184 GLMALGFMSFSGV 196
           GL+A+ FM FSGV
Sbjct: 177 GLLAMAFMGFSGV 189