Pairwise Alignments

Query, 198 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit E from Vibrio cholerae E7946 ATCC 55056

Subject, 194 a.a., Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 84.7 bits (208), Expect = 1e-21
 Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 18/191 (9%)

Query: 7   LLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGIAVIVVLTISVPVNNLVYNLVLKP 66
           +++  I  EN      LGMC  L  +       G+G+A + VL  S  V + + NL+  P
Sbjct: 6   VMMNGIIKENPIFVLLLGMCPTLGTTSSAINGMGMGLATMFVLICSNVVISSIKNLI--P 63

Query: 67  DALVEGVDLSFLNFITFIGVIAALVQILEMILDRFFPPLYNALGIFLPLITVNCAIFGGV 126
           D          +   +FI VIA+ V +L+MI+  + P LY  LG+F+PLI VNC + G  
Sbjct: 64  D---------MVRIPSFIVVIASFVTLLQMIMQAYVPDLYATLGLFIPLIVVNCIVLGRA 114

Query: 127 SFMVQRDYSFAESVVYGFGSGVGWMLAIVALAGIRE-----KMKYSDVPPGLRGLGITFI 181
                ++   A S+  G G G G+ +A+  L  +RE     K+    + P   G+ I  +
Sbjct: 115 EAFAAKNNPLA-SMFDGIGMGFGFTIALTLLGAVREFLGTGKIFNLTILPEEYGMLIFVL 173

Query: 182 TAG-LMALGFM 191
             G  +ALG++
Sbjct: 174 APGAFIALGYL 184