Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases from Pseudomonas stutzeri RCH2

 Score = 86.7 bits (213), Expect = 9e-22
 Identities = 74/339 (21%), Positives = 147/339 (43%), Gaps = 55/339 (16%)

Query: 74  GSCGQCRVKIKSGGGDILPTEL-DHISKGEAREGERLACQVAVKADMDLELPEEIFGVKK 132
           G+CG C+   ++G  D+    + D +S+ EA +G  L CQ+  ++D  + +P      K 
Sbjct: 43  GACGACKCFAEAGQYDLGEEYIEDALSEDEAAQGYVLTCQMRAESDCVVRVPASSDVCKT 102

Query: 133 WECTVISNDNKATFIKELKLAIP-DGESVP---FRAGGYIQIEAPAHHVKYADFDVPEKY 188
            + +  +  +    + +  +A+   GE++    F  G Y+ ++ P               
Sbjct: 103 AQASYEATISNVRQLSQSTIALSIKGEALTQLAFLPGQYVNLQVPG-------------- 148

Query: 189 RGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPGQMSSY 248
                           D+   RAYS ++   + G +   +R         NVP G MSS+
Sbjct: 149 ---------------TDQT--RAYSFSSLQRD-GEVSFLIR---------NVPGGLMSSF 181

Query: 249 IWSL-KAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSY 307
           +  + KAGD  T++GP G F+ ++    ++ + GG G+AP  + + +++    S+  +  
Sbjct: 182 LSGMAKAGDSLTLAGPLGSFYLREIKRPLLLLAGGTGLAPFTA-MLEKIAEQGSEHPLHL 240

Query: 308 WYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENYLKDH 367
            YG  +  ++  ++     AA   NF +   +S     D+     G++   +   +L + 
Sbjct: 241 IYGVSNDFDLVEMDRLADFAARIPNFTYSACVSS---TDSQYPQKGYVTQHIEPKHLNEG 297

Query: 368 EAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDF 406
           E     + Y+CGPP M  +V   ++  G++  N   + F
Sbjct: 298 EV----DIYLCGPPPMVESVNQFIREQGLQPANFYYEKF 332