Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella amazonensis SB2B

 Score =  622 bits (1603), Expect = 0.0
 Identities = 295/402 (73%), Positives = 342/402 (85%), Gaps = 2/402 (0%)

Query: 7   GVVMFTLIILALVLVILFAKSKLVPTGDITISINGDPEKAIVTQPGGKLLTALAGAGVFV 66
           G+ MFT+++  LV VIL A+SKLV +GD+ + IN D +K +    GGKLL ALAG  +FV
Sbjct: 6   GMGMFTVVVCILVAVILIARSKLVASGDVQLRINEDKDKTVAVPAGGKLLGALAGKNIFV 65

Query: 67  SSACGGGGSCGQCRVKIKSGGGDILPTELDHISKGEAREGERLACQVAVKADMDLELPEE 126
            SACGGGG+CGQCRVK+KSGGGDILPTELDHI+K EA+EG RLACQVAVK+DMDLEL +E
Sbjct: 66  PSACGGGGTCGQCRVKVKSGGGDILPTELDHITKKEAKEGCRLACQVAVKSDMDLELDDE 125

Query: 127 IFGVKKWECTVISNDNKATFIKELKLAIPDGESVPFRAGGYIQIEAPAHHVKYADFDVPE 186
           IFGVKKWEC VISN + AT+IKEL L +P+GE V F+AGGYIQIEAPAH V Y DFD+PE
Sbjct: 126 IFGVKKWECEVISNRSTATYIKELLLKVPEGEEVHFKAGGYIQIEAPAHEVHYKDFDIPE 185

Query: 187 KYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPGQMS 246
            +R DW+K+ LF   S+VD  ++RAYSMANYPEE G IMLNVRIATPP  +P +PPGQMS
Sbjct: 186 IFRDDWEKYGLFNLVSRVDSEVMRAYSMANYPEEQGRIMLNVRIATPP--SPELPPGQMS 243

Query: 247 SYIWSLKAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMS 306
           SYI++LK GDK  ISGPFGEFF K+TDAEMVFIGGGAGMAPMRSHIFDQLKR+K+ RKMS
Sbjct: 244 SYIFNLKPGDKVIISGPFGEFFVKETDAEMVFIGGGAGMAPMRSHIFDQLKRVKTSRKMS 303

Query: 307 YWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENYLKD 366
           +WYGARS RE+FY EDFDGLAA+N NF WH ALS+P PEDNWTGYTGFIHNVLYENYLK 
Sbjct: 304 FWYGARSLREVFYQEDFDGLAAQNPNFEWHIALSEPLPEDNWTGYTGFIHNVLYENYLKQ 363

Query: 367 HEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDFGG 408
           H+APEDCE+YMCGPP+MN++VI ML+ LGVE +NILLDDFGG
Sbjct: 364 HKAPEDCEFYMCGPPIMNSSVIAMLEGLGVERDNILLDDFGG 405