Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Parabacteroides merdae CL09T00C40

 Score =  410 bits (1055), Expect = e-119
 Identities = 223/420 (53%), Positives = 281/420 (66%), Gaps = 17/420 (4%)

Query: 3   TIIFGVVMFTLIILALVLVILFAKSKLVPTGDITISINGDPEKAIVTQPGGKLLTALAGA 62
           TI  G V+F +I L LV  +L AK+KLVP+G++ + +NG  EK I T  G  LL  L   
Sbjct: 11  TIAAGAVIFLVITLILVGALLAAKAKLVPSGNVDLKVNG--EKDIETPIGSTLLAGLQSG 68

Query: 63  GVFVSSACGGGGSCGQCRVKIKSGGGDILPTELDHISKGEAREGERLACQVAVKADMDLE 122
           G+F+SSACGGGG CGQCR ++  GGG+ILPTE    S+ + +E  RLACQ  VK DM ++
Sbjct: 69  GIFLSSACGGGGKCGQCRAQVLEGGGEILPTEKGFFSRKQIKEHWRLACQCKVKEDMVVQ 128

Query: 123 LPEEIFGVKKWECTVISNDNKATFIKELKLAIPDGESVPFRAGGYIQIEAPAHHVKY-AD 181
           +P+E+FGVK+WEC VISN N ATFIKE  +A+P GE + F  G Y QI+ PA+ + Y  D
Sbjct: 129 VPDEVFGVKEWECEVISNKNVATFIKEFIVALPKGEHMDFLPGSYAQIKIPAYAMDYNKD 188

Query: 182 FD---VPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPP---- 234
            D   + E+Y   W+KF LF  + K D P IRAYSMANYP E   IML VRIATPP    
Sbjct: 189 IDKSLIGEEYLPAWEKFGLFTLKCKNDTPTIRAYSMANYPAEGDRIMLTVRIATPPFKPK 248

Query: 235 --PNNPNVPPGQMSSYIWSLKAGDKCTISGPFGEFF-AKDTDAEMVFIGGGAGMAPMRSH 291
                 +V PG  SSYI++LK GDK T+SGP+G+F    D+  EM+++GGGAGMAP+R+ 
Sbjct: 249 PEVGFQDVMPGIASSYIFTLKPGDKVTMSGPYGDFHPIFDSKREMMWVGGGAGMAPLRAQ 308

Query: 292 IFDQLKRLK-SKRKMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTG 350
           I    K LK + RKMSY+YGAR+  E+FY+EDF  +  E  NF +H AL  P P  +  G
Sbjct: 309 IMHMTKTLKTTDRKMSYFYGARALNEVFYLEDFLEIEKEFPNFTFHLALDRPDPAADAAG 368

Query: 351 --YT-GFIHNVLYENYLKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDFG 407
             YT GF+H V+Y+ YLKDHEAPED EYYMCGP  M+ AV NML NLGV  E +  DDFG
Sbjct: 369 VKYTAGFVHQVIYDTYLKDHEAPEDIEYYMCGPGPMSKAVENMLDNLGVPREMLHFDDFG 428