Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella loihica PV-4

 Score =  718 bits (1854), Expect = 0.0
 Identities = 345/405 (85%), Positives = 371/405 (91%)

Query: 4   IIFGVVMFTLIILALVLVILFAKSKLVPTGDITISINGDPEKAIVTQPGGKLLTALAGAG 63
           +  GV MFT I+L LVLVILFAKSKLVP+GDITI IN D +KAI T  GGKLL ALA  G
Sbjct: 11  VYLGVSMFTAIVLVLVLVILFAKSKLVPSGDITIGINHDADKAIKTPAGGKLLGALASNG 70

Query: 64  VFVSSACGGGGSCGQCRVKIKSGGGDILPTELDHISKGEAREGERLACQVAVKADMDLEL 123
           +FVSSACGGGGSCGQC+V +KSGGGDILPTELDHISKG+AR G RL+CQV VK+DM++EL
Sbjct: 71  IFVSSACGGGGSCGQCKVIVKSGGGDILPTELDHISKGDARNGCRLSCQVNVKSDMEIEL 130

Query: 124 PEEIFGVKKWECTVISNDNKATFIKELKLAIPDGESVPFRAGGYIQIEAPAHHVKYADFD 183
            EEIFG+KKWEC+VISNDNKATFIKELKLAIPDGESVPFRAGGYIQIEAPAHHVKYADFD
Sbjct: 131 EEEIFGIKKWECSVISNDNKATFIKELKLAIPDGESVPFRAGGYIQIEAPAHHVKYADFD 190

Query: 184 VPEKYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPG 243
           VP +YRGDW+ F  F+ ESKVDE  IRAYSMANYPEE GIIMLNVRIATPPP N ++P G
Sbjct: 191 VPAEYRGDWEHFGFFKLESKVDEETIRAYSMANYPEEEGIIMLNVRIATPPPRNLSLPCG 250

Query: 244 QMSSYIWSLKAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKR 303
           +MSSYIWSLKAGDK TISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKR
Sbjct: 251 KMSSYIWSLKAGDKVTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKR 310

Query: 304 KMSYWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENY 363
           KMS+WYGARSKREMFYVEDFDGLAAENDNFVWH ALSDPQPEDNW GYTGFIHNVLYENY
Sbjct: 311 KMSFWYGARSKREMFYVEDFDGLAAENDNFVWHVALSDPQPEDNWDGYTGFIHNVLYENY 370

Query: 364 LKDHEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDFGG 408
           L+DH+APEDCE+YMCGPPMMNAAVI MLK+LGVE+ENILLDDFGG
Sbjct: 371 LRDHDAPEDCEFYMCGPPMMNAAVIGMLKDLGVEDENILLDDFGG 415