Pairwise Alignments

Query, 408 a.a., NADH:ubiquinone reductase (Na(+)-transporting) subunit F from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., Na(+)-translocating NADH-quinone reductase subunit F (RefSeq) from Shewanella loihica PV-4

 Score =  627 bits (1616), Expect = 0.0
 Identities = 295/401 (73%), Positives = 349/401 (87%), Gaps = 2/401 (0%)

Query: 7   GVVMFTLIILALVLVILFAKSKLVPTGDITISINGDPEKAIVTQPGGKLLTALAGAGVFV 66
           G+ MFT+++  LV+VIL AKSKLV  GD++I IN D +K+I T  G KLL ALA   +F+
Sbjct: 6   GIGMFTIVVCVLVMVILVAKSKLVINGDVSIRINDDDDKSITTAAGDKLLGALASKNIFI 65

Query: 67  SSACGGGGSCGQCRVKIKSGGGDILPTELDHISKGEAREGERLACQVAVKADMDLELPEE 126
            SACGGGG+CGQCRVK+KSGGGDILPTE DHI+K EA+EG RLACQVAVK DM+LEL EE
Sbjct: 66  PSACGGGGTCGQCRVKVKSGGGDILPTERDHINKKEAKEGCRLACQVAVKTDMELELEEE 125

Query: 127 IFGVKKWECTVISNDNKATFIKELKLAIPDGESVPFRAGGYIQIEAPAHHVKYADFDVPE 186
           IFGVKKW+C VISNDN+ATFIKEL L +P+GE V F+AGGYIQIEAPAH VKY+DFD+P 
Sbjct: 126 IFGVKKWQCEVISNDNQATFIKELLLKLPEGEDVKFKAGGYIQIEAPAHEVKYSDFDIPT 185

Query: 187 KYRGDWDKFNLFRYESKVDEPIIRAYSMANYPEEFGIIMLNVRIATPPPNNPNVPPGQMS 246
           +YR DW+K+ LF   S V+E ++RAYSMANYP+E G+IMLNVRIATPP  +  +PPG+MS
Sbjct: 186 EYRDDWEKYGLFDLVSTVEEDVLRAYSMANYPDEKGVIMLNVRIATPP--SEGLPPGKMS 243

Query: 247 SYIWSLKAGDKCTISGPFGEFFAKDTDAEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMS 306
           SYI++LKAGDK TISGPFGEFF K+TDAEMVFIGGGAGMAPMRSHIF+QLK  ++KRKM+
Sbjct: 244 SYIFNLKAGDKVTISGPFGEFFVKETDAEMVFIGGGAGMAPMRSHIFNQLKGEQTKRKMT 303

Query: 307 YWYGARSKREMFYVEDFDGLAAENDNFVWHCALSDPQPEDNWTGYTGFIHNVLYENYLKD 366
           +WYGARS+RE+FY E+FD LAAENDNF WH ALSDP PEDNW GYTGFIHNVLYENYLK+
Sbjct: 304 FWYGARSRREIFYQEEFDALAAENDNFEWHVALSDPLPEDNWDGYTGFIHNVLYENYLKN 363

Query: 367 HEAPEDCEYYMCGPPMMNAAVINMLKNLGVEEENILLDDFG 407
           H+APEDCE+YMCGPP+MN++VINML++LGVE+ENILLDDFG
Sbjct: 364 HKAPEDCEFYMCGPPIMNSSVINMLESLGVEQENILLDDFG 404