Pairwise Alignments

Query, 334 a.a., FAD:protein FMN transferase from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., thiamine biosynthesis lipoprotein apbE precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  199 bits (507), Expect = 6e-56
 Identities = 126/339 (37%), Positives = 186/339 (54%), Gaps = 23/339 (6%)

Query: 4   WL--VALASLLLLAGCEKPAEQVHLSGPTMGTTYNIKYIQQPGIADSKTLQTEIDRLLEE 61
           WL  + LA++ +LA   + AE    SG   GT Y I Y      AD   L+ EI+  L+ 
Sbjct: 9   WLAFLILATIWILARRNQKAEFNTASGFVFGTVYKIAYQHD---AD---LKPEIEAELKR 62

Query: 62  VNDQMSTYRKDSELSRFNQHTSSEPFAVSTQTLTVVKEAIRLNGLTEGALDVTVGPLVNL 121
            +  +S +   S +SR N++   E     +   T    ++ ++  T+GA D+T+ PL N 
Sbjct: 63  FDQSLSPFNDSSVISRVNRN---EELVTDSFFQTCFNRSMEISRETKGAFDITIAPLANA 119

Query: 122 WGFGPE--ARPDVVPTDEELNARRAITGIEHLTIEGNTLSKDIPELYVDLSTIAKGWGVD 179
           WGFG +  A PD +  D  L     ITG E + +E   + K  P + +  S +AKG+ VD
Sbjct: 120 WGFGFKKGAFPDSLMIDSLLQ----ITGYEKVKLENGKVVKQDPRVMLSCSAVAKGYSVD 175

Query: 180 VVADYLQSQGIENYMVEIGGEIRLKGLNRDGVPWRIAIEKPSVD----QRSVQEIIEPGD 235
           V+A  L  +GI+NYMV+IGGE+ +KG N  G  WRI I KP  D    ++ +Q ++   D
Sbjct: 176 VIARLLDRKGIKNYMVDIGGEVVVKGKNATGDLWRIGINKPYDDSLAVKQDIQVVLNLTD 235

Query: 236 YAIATSGDYRNYFEQDGVRYSHIIDPTTGRPINNRVVSVTVLDKSCMTADGLATGLMVMG 295
             +ATSG+YRNY+ +DG +Y+H IDP TG P+ + ++S TV+ + CMTAD LAT  MVM 
Sbjct: 236 LGMATSGNYRNYYYKDGKKYAHTIDPRTGYPVQHSILSSTVIAEDCMTADALATSFMVME 295

Query: 296 EERGMAVAEAN-QIPVLMIVKTDDG-FKEYASSSFKPFL 332
            E      +AN  I    I   ++G FK Y +   K ++
Sbjct: 296 LEEAEKFCKANPMIDAYFIYSGENGEFKTYYTDGMKRYM 334