Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 354 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Pseudomonas stutzeri RCH2

 Score =  314 bits (804), Expect = 3e-90
 Identities = 164/341 (48%), Positives = 225/341 (65%), Gaps = 2/341 (0%)

Query: 2   QDRIRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAM 61
           Q  +RKIIH+D DCF+AA+EMRD+P+     +AVGG   +RGVI+TCNY+AR +GVRSAM
Sbjct: 3   QPNLRKIIHIDCDCFYAAIEMRDDPSLARRPIAVGGAADRRGVIATCNYEARAYGVRSAM 62

Query: 62  PTAQALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQG 121
            +  ALKLCP L ++  RM  Y+  S++IQ IF+ YT LIEPLSLDEAYLDV+    + G
Sbjct: 63  ASGHALKLCPDLLILRPRMEAYREASREIQNIFRTYTELIEPLSLDEAYLDVTACEHFSG 122

Query: 122 SATLIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLP 181
           SAT IA+ IRR +WQ+L +T SAGVAP KFLAK+AS+ NKPDGL+V+TP +V E V  L 
Sbjct: 123 SATRIAEDIRRRVWQQLRITVSAGVAPNKFLAKIASEWNKPDGLFVITPAQVDEFVQELE 182

Query: 182 LEKIPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTE 241
           ++++ GVG+V  EKL + G++   D+R      L+ +FG  G  LW  + GIDER V  E
Sbjct: 183 VKRLHGVGRVTAEKLARLGIHTCNDLREWGRLALVREFGAFGERLWGLARGIDERPVQVE 242

Query: 242 RERKSVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQGIKVKFADFQ 301
             R+SV VE T+ +++     C + + + L  +L  R++R        K  +K+KF DF 
Sbjct: 243 NRRQSVSVEQTYDRDLPDLAACLERLPE-LLQQLATRMARLDGSYRPGKPFVKLKFHDFT 301

Query: 302 QTTIEHVHPALELDYFHELLEQVLTRQQGREIRLLGLSVML 342
           QTT+E     LELD + +LL    +R   R +RL+G+ V L
Sbjct: 302 QTTLEQAGAGLELDDYSDLLAIAFSR-GARPVRLIGVGVRL 341