Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., DNA polymerase IV (EC 2.7.7.7) from Xanthomonas campestris pv. campestris strain 8004

 Score =  231 bits (590), Expect = 2e-65
 Identities = 123/254 (48%), Positives = 169/254 (66%), Gaps = 1/254 (0%)

Query: 5   IRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTA 64
           +RKI+HVDMD F+A+VE RD+P+ R   + V      R V+   +Y+AR FG+RSAMP  
Sbjct: 1   MRKIVHVDMDAFYASVEQRDDPSLRGKPVVVAWRGA-RSVVCAASYEARTFGIRSAMPAV 59

Query: 65  QALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSAT 124
           +A +LCP    VP   + YK+VS+Q++ IF R+T L+EPLSLDEAYLDV+E+      AT
Sbjct: 60  RAERLCPDAVFVPPDFARYKAVSRQVREIFHRHTDLVEPLSLDEAYLDVTEAKTGMQLAT 119

Query: 125 LIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEK 184
            IAQ IR  I +E  LTASAG+AP KFLAK+ASD  KPDG +V+ P +V   +  LP+ +
Sbjct: 120 EIAQLIRTQIREETQLTASAGIAPNKFLAKIASDWRKPDGQFVIAPSRVDAFLLPLPVNR 179

Query: 185 IPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERER 244
           IPGVGKV   KL   G+   +D+R     +L   FG  G SL++++ GIDER V  ++E 
Sbjct: 180 IPGVGKVMDGKLAALGIVTVSDLRLRPLEELQAHFGSFGQSLYRRARGIDERPVEPDQEV 239

Query: 245 KSVGVEYTFSQNIS 258
           +SV  E TFS++++
Sbjct: 240 QSVSSEDTFSEDLA 253