Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., Y-family DNA polymerase from Synechocystis sp000284455 PCC 6803

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 62/265 (23%), Positives = 125/265 (47%), Gaps = 14/265 (5%)

Query: 5   IRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTA 64
           +  I  VD + F+ + E    P      + V  +    G +   + +A+  G++  +P  
Sbjct: 1   MNSIALVDCNNFYVSCERVFQPLLNGKPVVVLSNND--GCVVARSSEAKALGIKMGVPLF 58

Query: 65  QALKLCPQ--LHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGS 122
           +   L  +  + V      +Y  +S +I T  Q ++ ++E  S+DEA+L+++ +     S
Sbjct: 59  KIRDLVERHNIQVFSSNYCLYGDLSHRIMTSLQLFSPVVEIYSIDEAFLELTPNQ----S 114

Query: 123 ATLIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQ---EMVDS 179
            T   + IRR + Q + +  S G+AP K LAKVA+D+ K  G      DK +    ++ +
Sbjct: 115 NTNYGEEIRRCLKQWVGIPVSIGIAPTKVLAKVATDVAKQSGAGTFCLDKAEAADTILAT 174

Query: 180 LPLEKIPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGID--ERE 237
           +P+  I G+G+   +     G+      ++A+   +  + G +G  L  +  GI     E
Sbjct: 175 MPIADIWGIGRRLEKWFTTRGVSTALQFKQANPELIRKKMGVVGQRLLLELQGISCLPLE 234

Query: 238 VVTERERKSVGVEYTFSQNISTFQE 262
           ++   ++++  V  +F+Q ++T  E
Sbjct: 235 LIPNPKQETC-VSRSFAQAVTTLDE 258