Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 362 a.a., DNA polymerase IV from Ralstonia solanacearum GMI1000

 Score =  306 bits (783), Expect = 7e-88
 Identities = 167/351 (47%), Positives = 231/351 (65%), Gaps = 3/351 (0%)

Query: 5   IRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTA 64
           +RKIIH D DCF+AA+EMRD+P      LAVGG  ++RGV++TCNY+ARKFG+ SAMP A
Sbjct: 6   VRKIIHCDCDCFYAAIEMRDDPRLVGRPLAVGGRPERRGVVATCNYEARKFGIHSAMPMA 65

Query: 65  QALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSAT 124
           QA+K CP L +VP  M  Y+ V++QI  I+Q YT L+EPLSLDEAYLDV++S    GS T
Sbjct: 66  QAVKRCPDLLIVPPAMDKYRQVARQIFAIYQGYTPLVEPLSLDEAYLDVTDSPMLAGSGT 125

Query: 125 LIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEK 184
            IA+ IRR + +E+ +T SAGVAP KF+AK+ASD NKPDGL+VV P++V   V +LP+E+
Sbjct: 126 RIAEDIRRRVREEIGITVSAGVAPNKFIAKIASDWNKPDGLFVVRPEQVDAFVAALPVER 185

Query: 185 IPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERER 244
           + GVGKV   KL + G     D+R     +L   FG  G  L     GID R+V   + R
Sbjct: 186 LFGVGKVTAAKLRRLGAQTCGDLRGWGADRLQQHFGSFGFRLHDLCRGIDHRQVQPSQIR 245

Query: 245 KSVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQGIKVKFADFQQTT 304
           KSV VE T++ ++ T  +C + +   L  +L AR+ RA     I K  +K++FADF+ TT
Sbjct: 246 KSVSVEETYATDLRTLDDCQREL-TILVDQLAARVERARAGDMIHKTFVKLRFADFRGTT 304

Query: 305 IEHVHPALELDYFHELLEQVLTRQQGREIRLLGLSVML-KPELQMKQLSMF 354
           +E V+P + L  F+ LL Q   R++   +RLLG+ V L + +   +Q ++F
Sbjct: 305 VECVYPQVALPVFNRLLAQGFERRR-MPVRLLGVGVRLHETDAHARQQALF 354