Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., Probable DNA polymerase IV DinX (pol IV 1) (DNA nucleotidyltransferase (DNA-directed)) from Mycobacterium tuberculosis H37Rv

 Score =  144 bits (363), Expect = 5e-39
 Identities = 100/305 (32%), Positives = 157/305 (51%), Gaps = 17/305 (5%)

Query: 8   IIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQAL 67
           ++H+DMD FFA+VE    P  R   + VGG    RGV++  +Y+AR +G RSAMP  QA 
Sbjct: 1   VLHLDMDAFFASVEQLTRPTLRGRPVLVGGLGG-RGVVAGASYEARAYGARSAMPMHQAR 59

Query: 68  KLCPQLHVV-PGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSE-STAYQGSATL 125
           +L     VV P R  VY   S+++    +    ++E LS DEA+ +  + + A       
Sbjct: 60  RLIGVTAVVLPPRGVVYGIASRRVFDTVRGLVPVVEQLSFDEAFAEPPQLAGAVAEDVET 119

Query: 126 IAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEKI 185
             + +RR +  E  L AS G    K +AK+AS L KPDG+ VV   + Q ++  LP+ ++
Sbjct: 120 FCERLRRRVRDETGLIASVGAGSGKQIAKIASGLAKPDGIRVVRHAEEQALLSGLPVRRL 179

Query: 186 PGVGKVALEKLHQAGL-YVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERER 244
            G+G VA EKLH+ G+  +G     +D          +G +L + + GID+R VV   E 
Sbjct: 180 WGIGPVAEEKLHRLGIETIGQLAALSDAEAANILGATIGPALHRLARGIDDRPVVERAEA 239

Query: 245 KSVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQ-----RGIIKQGIKVKFAD 299
           K +  E TF+ +++T ++        L+  +D+    AH +     RG     +K+K +D
Sbjct: 240 KQISAESTFAVDLTTMEQ--------LHEAIDSIAEHAHQRLLRDGRGARTITVKLKKSD 291

Query: 300 FQQTT 304
               T
Sbjct: 292 MSTLT 296