Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., DNA-directed DNA polymerase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 51/212 (24%), Positives = 97/212 (45%), Gaps = 16/212 (7%)

Query: 11  VDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQALKLC 70
           VD + F+A+ E    P  R   + V  +    G I + + +A+  GV    P  +  +  
Sbjct: 65  VDCNNFYASCERLFRPDLRGKPIVVLSNND--GCIISRSDEAKALGVEMGAPAFKVRREL 122

Query: 71  PQL--HVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSATLIAQ 128
            +L  HV     ++Y  +S ++       +  ++  S+DEA+L +    A    A  + +
Sbjct: 123 ARLGVHVFSSNYALYGDLSSRVMRTLGTLSPEVDVYSIDEAFLPLRGPLAADPVA--VGR 180

Query: 129 AIRRDIWQELNLTASAGVAPIKFLAKVASDLNKP----DGLYVVTPDK------VQEMVD 178
           A+R  + +   +  S G+AP + LAK+A  + K     +G++ +   +      V +++ 
Sbjct: 181 ALRERVARWTGIPISVGIAPTRTLAKIAGRVAKRTPRCEGVFDLARSREVLGMSVDDLLG 240

Query: 179 SLPLEKIPGVGKVALEKLHQAGLYVGADVRRA 210
           SLP+E + GVG+     L  AG+     +R A
Sbjct: 241 SLPVESVWGVGRRLAGMLRGAGIATARALRDA 272