Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., DNA polymerase IV from Klebsiella michiganensis M5al

 Score =  395 bits (1016), Expect = e-115
 Identities = 209/345 (60%), Positives = 254/345 (73%), Gaps = 3/345 (0%)

Query: 5   IRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTA 64
           +RKIIHVDMDCFFAAVEMRDNPA R+I +A+GG   QRGVIST NY ARKFGVRSAMPTA
Sbjct: 1   MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRVQRGVISTANYPARKFGVRSAMPTA 60

Query: 65  QALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSAT 124
            ALKLCP L ++PGR   YK  S  I+ IF RYTSLIEPLSLDEAYLDVS+S   QGSAT
Sbjct: 61  TALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSLIEPLSLDEAYLDVSDSVHCQGSAT 120

Query: 125 LIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEK 184
           L+AQ IR  I +ELNLTASAG+AP+KFLAK+ASDLNKP+G +V+ P +V E V +LPL K
Sbjct: 121 LMAQEIRETIHRELNLTASAGIAPVKFLAKIASDLNKPNGQFVIAPHQVAEFVKTLPLAK 180

Query: 185 IPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERER 244
           IPGVGKV+  KL   GL   ADV+ +D   LL +FG+ G  LW++S GIDERE+ +ER+R
Sbjct: 181 IPGVGKVSAAKLESMGLRTCADVQNSDLAMLLKRFGKFGRILWERSQGIDEREISSERQR 240

Query: 245 KSVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQGIKVKFADFQQTT 304
           KSVGVE T  ++I  + EC  +IE  LYPEL+ RL++  P   I +QG+K+KF DFQ TT
Sbjct: 241 KSVGVERTLVEDIHEWAECESIIE-NLYPELERRLAKVKPDLLIARQGVKLKFNDFQLTT 299

Query: 305 IEHVHPALELDYFHELLEQVLT-RQQGREIRLLGLSV-MLKPELQ 347
            EHV P L  D       +    R+ GR +RL+GL V +L P+L+
Sbjct: 300 QEHVWPRLNKDDLITTAHKAWNERRGGRGVRLVGLHVTLLDPQLE 344