Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 434 a.a., Nucleotidyltransferase/DNA polymerase involved in DNA repair from Sphingomonas koreensis DSMZ 15582

 Score =  105 bits (262), Expect = 2e-27
 Identities = 99/365 (27%), Positives = 166/365 (45%), Gaps = 30/365 (8%)

Query: 9   IHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQALK 68
           +++D++ FFAAVE + NP  R   + V        V    + QA+KFG+ +  P  +A +
Sbjct: 17  LYLDLNSFFAAVEQQLNPDLRGKPIIVAPVNSDTTVAIAASVQAKKFGIGTGTPVWEAKR 76

Query: 69  LCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSATLIAQ 128
           LC  L V PG+   Y      I     ++  +    S+DE    + ++     +A  +A+
Sbjct: 77  LCRDLIVTPGQHEKYVEFHNLIVDEIWKHIPVTSIGSIDEVACRLLDNENDPETAIALAR 136

Query: 129 AIRRDIWQELN--LTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEKIP 186
            I+  I   +   LT+S G+AP + LAK+ASD+ KPDGL V+T D +   + +L L  I 
Sbjct: 137 RIKAGIRANVGECLTSSVGIAPNRLLAKLASDMQKPDGLTVLTQDMLPHRLFALKLRDIA 196

Query: 187 GVGKVALEKLHQAG-LYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERERK 245
           G+G    ++L Q G L +G    R          G  G  LW   HG D  E  T  + +
Sbjct: 197 GIGAKMEKRLAQQGILDIGQLCERRPRDAGSAWGGVNGDRLWYLLHGFDLPEKPT--QNR 254

Query: 246 SVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQ--GIKVKFADFQQT 303
           ++G  +  S       E  ++  ++L  +  +RL R    +G + +   +  +F D + T
Sbjct: 255 TIGHSHVLSPR-KRGLEPTRLTARRLALKSASRLRR----KGYVSRLLVLHARFEDDKST 309

Query: 304 --------------TIEHVHPALELDYFHELLEQVLTRQQGREIRLLGLSVMLKPELQMK 349
                         T+ H   ++    F  L E    R  G  IR++G+++     L+ +
Sbjct: 310 WRTSIKLPSTQDSFTVLHALDSI----FPRLAEAGRARTHGFAIRMIGVTLAEIAPLEGE 365

Query: 350 QLSMF 354
           Q S+F
Sbjct: 366 QESLF 370