Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., DNA polymerase IV from Enterobacter sp. TBS_079

 Score =  399 bits (1025), Expect = e-116
 Identities = 210/345 (60%), Positives = 254/345 (73%), Gaps = 2/345 (0%)

Query: 5   IRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTA 64
           +RKIIHVDMDCFFAAVEMRDNPA R+I +A+GG   QRGVIST NY ARKFGVRSAMPTA
Sbjct: 1   MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRVQRGVISTANYPARKFGVRSAMPTA 60

Query: 65  QALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSAT 124
            ALKLCP L ++PGR   YK  S  I+ IF RYTSLIEPLSLDEAYLDV++S    GSAT
Sbjct: 61  MALKLCPHLTLLPGRFEAYKEASLHIREIFSRYTSLIEPLSLDEAYLDVTDSLHCHGSAT 120

Query: 125 LIAQAIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEK 184
           L+AQ IRR I+ ELNLTASAGVAP+KFLAK+ASDLNKPDG YV+TP++V   + +LPL K
Sbjct: 121 LMAQEIRRAIFNELNLTASAGVAPVKFLAKIASDLNKPDGQYVITPEEVPAFLKTLPLGK 180

Query: 185 IPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERER 244
           IPGVGKV+  KL   GL    DV+R+D   LL +FG+ G  LW++S GIDER V +ER R
Sbjct: 181 IPGVGKVSAAKLESMGLRTCEDVQRSDLAMLLKRFGKFGRVLWERSQGIDERSVSSERLR 240

Query: 245 KSVGVEYTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQGIKVKFADFQQTT 304
           KSVGVE T  ++I  + EC  +I  +LYPEL+ RL++  P   I +QG+K+KF DFQQTT
Sbjct: 241 KSVGVERTLMEDIHDWSECEVIITDQLYPELERRLAKVKPDLLIARQGVKLKFNDFQQTT 300

Query: 305 IEHVHPALELDYFHELLEQVL-TRQQGREIRLLGLSV-MLKPELQ 347
            EHV P L  D       +    R+ GR +RL+GL V +L P+L+
Sbjct: 301 QEHVWPRLNKDDLIATARKAWEERRAGRGVRLVGLHVTLLDPQLE 345