Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., umuC protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 61.6 bits (148), Expect = 4e-14
 Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 19/263 (7%)

Query: 11  VDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQALKL- 69
           VD + F+A+ E    P  +   + V  +    G +   + +A+  GV    P  +   + 
Sbjct: 45  VDCNNFYASCERLFRPDLKGRPVVVLSNND--GCVIARSAEAKALGVPMGAPEFKVRDML 102

Query: 70  -CPQLHVVPGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSATLIAQ 128
               + V     ++Y  +SQ++          +E  S+DEA++ +  + A    A  + +
Sbjct: 103 RAHDVAVFSSNYALYGDLSQRVMRTLATVVPRVEVYSIDEAFIPLPAALAADPVA--VGR 160

Query: 129 AIRRDIWQELNLTASAGVAPIKFLAKVASDLNKPDGLYVVTPDKVQEMVD------SLPL 182
            +R+ + Q + +  S GV P + LAK+A+ L+K D  Y    D   E VD      S+ +
Sbjct: 161 TLRQRVAQWVGIPVSVGVGPTRTLAKLANRLSKQDSAYGNVFDLTPETVDMDRVLASVDV 220

Query: 183 EKIPGVGKVALEKLHQAGLYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTER 242
             + GVG+ + E L   G+     +R AD    L    R+  + W+    +     +T+ 
Sbjct: 221 GDVWGVGRRSAEMLRGRGILTARALRDAD---PLWVRQRMTVTGWRTQQELRGMPCLTDD 277

Query: 243 E----RKSVGVEYTFSQNISTFQ 261
           +    R+S+    +F Q + T +
Sbjct: 278 DLPVPRRSIRSSRSFGQMVRTLE 300