Pairwise Alignments

Query, 360 a.a., DNA polymerase IV from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., DNA-directed DNA polymerase (RefSeq) from Shewanella sp. ANA-3

 Score = 61.2 bits (147), Expect = 5e-14
 Identities = 48/214 (22%), Positives = 92/214 (42%), Gaps = 8/214 (3%)

Query: 12  DMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNYQARKFGVRSAMPTAQALKLCP 71
           D + F+++ E   NP YR   L V  +    G+  T + +A   G++   P  Q  + C 
Sbjct: 9   DGNKFYSSCEQIFNPQYRGKPLIVVSNND--GMTVTLSPEAAALGLKKFTPYFQVAEFCR 66

Query: 72  QLHVV--PGRMSVYKSVSQQIQTIFQRYTSLIEPLSLDEAYLDVSESTAYQGSATLIAQA 129
              VV      ++Y  +S Q   +  R      P S+DE + +       Q + +++ + 
Sbjct: 67  ANGVVVCSSNYALYSEISSQFMKVASRECFSYFPYSIDEIFAEFGNDDTPQ-NLSILGRK 125

Query: 130 IRRDIWQELNLTASAGVAPIKFLAKVASDLNKP---DGLYVVTPDKVQEMVDSLPLEKIP 186
           +R D+W+E+ L    G+     LAK A+   K     G+ V+     + ++ ++    + 
Sbjct: 126 LRHDVWREVRLPIGVGLGDTLTLAKAANHAAKRLGYRGVCVIKAHNREAILGAMLTTDVW 185

Query: 187 GVGKVALEKLHQAGLYVGADVRRADYRKLLHQFG 220
           GVGK   ++L   G++    + +   +     FG
Sbjct: 186 GVGKRIGQRLSSMGIHTALQLAQMKTKTARKMFG 219