Pairwise Alignments

Query, 505 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 496 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score = 98.6 bits (244), Expect = 5e-25
 Identities = 73/224 (32%), Positives = 118/224 (52%), Gaps = 16/224 (7%)

Query: 283 IKPITTASQVLQQFKTSGGKMPDASTFISSEMKEFATTINRIVGQLEDSQQVLRWQSEHD 342
           ++P++  + +    K +G   P + +  +  + +   +I  ++  L D  Q  + Q+  D
Sbjct: 283 VQPMSQRNTIFYGKKLNGDVFPASISIATYGVGDEKHSIV-VIKDLSDEMQY-KSQANTD 340

Query: 343 PLTRISNRRHLEKQLKSYLS--DRPQAYLVLFLVDIDFFKRFNDSFGHLAGDEALCSVAD 400
           PLT+++NRR + +QL + +S  +R Q  L + + DID FK  ND  GHL GD+ L  VA 
Sbjct: 341 PLTKVANRRAINRQLAAAISRSNRQQTPLAVCIFDIDHFKAVNDKHGHLVGDDVLQRVAK 400

Query: 401 VLQSVEFHGEKIVARFGGEEFCVVLASDCAFDAEQYAQQMRSKIEQLA--IANPVDALCQ 458
           +  S        V R+GGEEF ++L       A+ +A ++R ++++ +  I  PV     
Sbjct: 401 IF-SDAIRKTDFVGRWGGEEFVIILEDTDKEGAKHFADKLRQEVKRRSQGIDFPV----- 454

Query: 459 YLTVSIG-GVYAISPKMESYLSLFHQADMALYHAKEHGRDRYVV 501
            +T+S G  VY    K +    LF+ AD ALY AKE GRD  VV
Sbjct: 455 AITLSAGVSVYCQDDKQD---CLFNHADQALYRAKESGRDCVVV 495