Pairwise Alignments

Query, 505 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  104 bits (260), Expect = 8e-27
 Identities = 68/194 (35%), Positives = 102/194 (52%), Gaps = 10/194 (5%)

Query: 310 ISSEMKEFATTINRIVGQLEDSQQVLRWQSEHDPLTRISNRRHLEKQL--KSYLSDRPQA 367
           +  +++E    +   + +L +  Q L  QS  D LT + NR   +K+L  +S +S R + 
Sbjct: 425 LEQKVQERTLELEITLRELHEVNQKLTEQSTIDSLTGVKNRSAFDKRLLAESRISRRQET 484

Query: 368 YLVLFLVDIDFFKRFNDSFGHLAGDEALCSVADVLQSVEFHGEKIVARFGGEEFCVVLAS 427
            + L ++DID FK  ND FGHLAGD+AL  +A  LQ        +V+RFGGEEF ++L +
Sbjct: 485 PIALLMLDIDRFKSINDQFGHLAGDQALKLIAQTLQQHLKRPTDLVSRFGGEEFAIILPN 544

Query: 428 DCAFDAEQYAQQMRSKIEQLAI---ANPVDALCQYLTVSIGGVYAISPKMESYLSLFHQA 484
             A  A Q A+ +R  +  + +     P+      LTVSIG    +    +    L  QA
Sbjct: 545 TTADGALQVAESIRDTVSCIGLTWEGKPIP-----LTVSIGVSADVIMNEQHSTELLEQA 599

Query: 485 DMALYHAKEHGRDR 498
           D ALY AK  GR++
Sbjct: 600 DKALYQAKNSGRNQ 613