Pairwise Alignments

Query, 505 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 94.4 bits (233), Expect = 6e-24
 Identities = 64/199 (32%), Positives = 106/199 (53%), Gaps = 9/199 (4%)

Query: 306 ASTFISSEMKEFATTINRIVGQLEDSQQVLRWQSEHDPLTRISNRRHLEKQLKSYLSDRP 365
           ++ F+++++++  T I+ +  +LE +++ + +    D LT   NRR  +  +   ++  P
Sbjct: 150 STEFLTTQLQKAQTEIDALKQKLEKTEKDVLY----DALTGCLNRRAFDADIAGMIAQAP 205

Query: 366 QAYLVLFLVDIDFFKRFNDSFGHLAGDEALCSVADVLQSVEFHGEKIVARFGGEEFCVVL 425
           +    L LVDID FK FND++GH  GD+ L +VA  LQ     G K+  RFGGEEF +++
Sbjct: 206 EG-TCLILVDIDHFKAFNDNYGHQLGDQVLKAVAKRLQEACRDGSKLY-RFGGEEFAIIV 263

Query: 426 ASDCAFDAEQYAQQMRSKIEQLAIAN-PVDALCQYLTVSIGGVYAISPKMESYLSLFHQA 484
                    Q A+ MR  +E+L + +   D L   +T S G   A   + +S + L  + 
Sbjct: 264 PKSQLRITRQLAEAMRRGLEKLCLKDRRKDQLVDNITASFG--VAQWQERQSVVQLIEKT 321

Query: 485 DMALYHAKEHGRDRYVVRN 503
           D  LY AK  GR+R +  N
Sbjct: 322 DKLLYEAKRLGRNRVMPIN 340