Pairwise Alignments

Query, 505 a.a., diguanylate cyclase from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., GGDEF family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 7/188 (3%)

Query: 314 MKEFATTINRIVGQLEDSQQVLRWQSEHDPLTRISNRRHLEKQLKSYL--SDRPQAYLVL 371
           M++    + + V  L+   + L   +  D LT + NRR  E  ++ ++  ++       L
Sbjct: 131 MEQSLNAMGQEVQNLKTEMENLSLAAMTDQLTSLHNRRAYEIAIQDHIHRAEEQHTRCSL 190

Query: 372 FLVDIDFFKRFNDSFGHLAGDEALCSVADVLQSVEFHGEKIVARFGGEEFCVVLASDCAF 431
            L+DID FK FND++GH  GD+ L  VA  L+     G+  VAR+GGEEF V+L +    
Sbjct: 191 LLIDIDRFKVFNDTYGHQVGDKVLAYVALALKQC-VRGDDFVARYGGEEFVVLLPNTHFH 249

Query: 432 DAEQYAQQMRSKIEQ--LAIANPVDALCQYLTVSIGGVYAISPKMESYLSLFHQADMALY 489
           DA Q A+ +R +I +  LAI          +TVSIG   A   K +   +LF +AD ALY
Sbjct: 250 DALQVAETLRGRISERRLAIGKDKKLSLGAITVSIG--LASLQKGDDAETLFSRADKALY 307

Query: 490 HAKEHGRD 497
            AK  GR+
Sbjct: 308 EAKSDGRN 315