Pairwise Alignments

Query, 451 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., Na+-dependent transporters of the SNF family from Pseudomonas stutzeri RCH2

 Score =  242 bits (618), Expect = 2e-68
 Identities = 157/424 (37%), Positives = 224/424 (52%), Gaps = 41/424 (9%)

Query: 6   SRETFSSRLGFILAAAGAAVGLGNIWGFPTQAASNGGGAFLLVYLILIFVVAFPMLVVEM 65
           SR  +SSR  F LAA G+AVGLGNIW FP     NGGGAF+LVYL  I ++  P+L+ E+
Sbjct: 24  SRGLWSSRWVFFLAATGSAVGLGNIWKFPYVTGQNGGGAFVLVYLACILLIGIPLLMTEV 83

Query: 66  AIGRYGQANPVDSMRSLTSQPAAKKVGGFVGWVGLSVPSAVLAFYSIVGGWIICFLLGAM 125
            IGR G+ANP  ++  L  +  A      VGW+G      +L+FY +V GW + ++    
Sbjct: 84  MIGRRGRANPDGAVARLAREAGASSRWRVVGWLGGLTGFLILSFYLVVAGWALAYVPATF 143

Query: 126 TDLFGFTAASAWLKGFSVERNLFGTL------------IFYVLTILIVQGGVKQGIERWS 173
           +   GF   S    G      LFG L            +    T+LIV  GV+ G+ER  
Sbjct: 144 SG--GFAGVSGEASG-----ELFGALLADPLRLVVCATLVLAATMLIVGFGVRGGLERSL 196

Query: 174 TRLMPALFVLFAVLFIYIMTQQGAWEGLKHYLIPDFEKVWDRKLILAAMGQGFFSLTIGG 233
             LMP LFVL  VL +Y   +    + L+   +PDF  +   + +L A+G  FF+L++G 
Sbjct: 197 RFLMPGLFVLMLVLVVYAAIEGEFAQALQFLFVPDFSAL-TAQSVLIALGHAFFTLSLGC 255

Query: 234 CSMLIYGSYLSKKENLPKMAMSVTLVDTAVAFIAGLVVLPAMFVAMNKGVQIYAQDGSLL 293
            +M++YGSYL +  ++ K ++ V L DTAVA +AGL + P +F     G++  A  G   
Sbjct: 256 GAMMVYGSYLPEGTSIAKTSILVALADTAVALLAGLAIFPLVF---GNGLEPGAGPG--- 309

Query: 294 SSDTLVFTVLPLMFDSLGLLGQIFAMVFFLLLTIAALTSSISMLECPVALVGERFNTRRT 353
               L+F  LP+ F  +  LGQ+   +FF++L IAALTS+IS+ E  +A + ERF   RT
Sbjct: 310 ----LIFVTLPIAFGQMP-LGQVVGGLFFIMLVIAALTSAISLSEPSIAWLTERFRISRT 364

Query: 354 PTSWVLGGLIALFSVVIVYNFG----------ALFGLVATLATQYLQPTAALMFCLFGGW 403
                 G ++ L S+  V++F             F  +  L T +L P   L   LF GW
Sbjct: 365 KAVLGSGLVLWLLSLGSVFSFNHWADYQLFGKTFFDTLDYLTTNWLMPLGGLGTVLFTGW 424

Query: 404 VWQR 407
           V QR
Sbjct: 425 VLQR 428