Pairwise Alignments

Query, 451 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 486 a.a., Na+-dependent transporters of the SNF family from Pseudomonas stutzeri RCH2

 Score =  223 bits (569), Expect = 8e-63
 Identities = 145/466 (31%), Positives = 237/466 (50%), Gaps = 33/466 (7%)

Query: 1   MAQSNSRETFSSRLGFILAAAGAAVGLGNIWGFPTQAASNGGGAFLLVYLILIFVVAFPM 60
           M +   +  + SR GFILAA G+AVGLGNIW FP      GGGAF+L+YL+ I  +  P+
Sbjct: 1   MTREKPKNLWLSRWGFILAATGSAVGLGNIWKFPYITGEFGGGAFVLMYLLCILAIGVPV 60

Query: 61  LVVEMAIGRYGQANPVDSMRSLTSQPAAKKVGGFVGWVGLSVPSAVLAFYSIVGGWIICF 120
           ++ E+AIGR G+ +P+D++  +  +     +   VG + ++    +L FY +V GW   +
Sbjct: 61  MMCEIAIGRRGRGSPIDAIGRVVRENNGNPLWKAVGGMAMTAGFLILCFYVVVAGWAFAY 120

Query: 121 LLGAMTDLFGFTAASAWLKGFSVERN----LFG-TLIFYVLTILIVQGGVKQGIERWSTR 175
            +  +      T+  A    F    +    L G +L+  +LT+ IV  GV++GIE     
Sbjct: 121 TVKMLDGSLAATSVEALGGVFEAHNSNPWQLGGWSLLVALLTLWIVAKGVQKGIENAVRW 180

Query: 176 LMPALFVLFAVLFIYIMTQQGAWEGLKHYLIPDFEKVWDRKLILAAMGQGFFSLTIGGCS 235
           +MP L VL  +L  Y +T  G  +G       D  K+    L LAA+G  FF+L++   +
Sbjct: 181 MMPGLAVLLLILVGYAVTSGGFDQGFAFLFSFDTSKITGEAL-LAALGHAFFTLSLASGA 239

Query: 236 MLIYGSYLSKKENLPKMAMSVTLVDTAVAFIAGLVVLPAMFVAMNKGVQIYAQDGSLLSS 295
           +L YGSY+   +++ +    V + DT VA +AGL + P +F     G+   A  G     
Sbjct: 240 ILTYGSYIPDDQSIARTTFMVAIADTCVALLAGLAIFPIIFA---NGMDPTAGPG----- 291

Query: 296 DTLVFTVLPLMFDSLGLLGQIFAMVFFLLLTIAALTSSISMLECPVALVGERFNTRRTPT 355
             L+F  LPL F  +   G  F ++FF +++IAALTS+ISM+E  VA + E+    R   
Sbjct: 292 --LIFMSLPLAFQQMP-FGTAFGVLFFAMVSIAALTSAISMIEATVAYLNEKHGISRLKA 348

Query: 356 SWVLGGLIALFSVVIVYNFGAL----------FGLVATLATQYLQPTAALMFCLFGGWVW 405
           +   G ++ + S++ + +F  +          F  +  L ++++ P   +   L  G+  
Sbjct: 349 AMGSGAVLLVISMLAMLSFNLMSGWTPMGKNFFDWLDYLTSRWMMPLGGIFTVLLAGYAL 408

Query: 406 QRDAKMKELQAGFPELQQSLFGKIWPWYVKFVCPVLVATVIWASFG 451
           + +    EL    P L  +L    W + V++VCPVL+  V   + G
Sbjct: 409 RSEIMRDEL--NLPPLGYAL----WLFMVRYVCPVLILMVFLHALG 448