Pairwise Alignments

Query, 451 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., sodium:neurotransmitter symporter (RefSeq) from Shewanella loihica PV-4

 Score =  468 bits (1203), Expect = e-136
 Identities = 224/438 (51%), Positives = 319/438 (72%), Gaps = 1/438 (0%)

Query: 10  FSSRLGFILAAAGAAVGLGNIWGFPTQAASNGGGAFLLVYLILIFVVAFPMLVVEMAIGR 69
           FSSR+GFI+AAAG+AVG+GNIWGFPTQAA++GGGAFLLVYL+LIF++ +PMLV E+ IGR
Sbjct: 9   FSSRIGFIMAAAGSAVGVGNIWGFPTQAATHGGGAFLLVYLVLIFLLGYPMLVAELMIGR 68

Query: 70  YGQANPVDSMRSLTSQPAAKKVGGFVGWVGLSVPSAVLAFYSIVGGWIICFLLGAMTDLF 129
           +GQ NP D+M  L S   ++ +G  +G+  +   + +  FYSI+ GW + F L  +  L 
Sbjct: 69  HGQTNPADAMAKLGSSKLSRNLGKTIGFASIITATLICTFYSILSGWFVSFTLAPIARLV 128

Query: 130 GFTAASAWLKGFSVERNLFGTLIFYVLTILIVQGGVKQGIERWSTRLMPALFVLFAVLFI 189
           G    + WL  FS+ERNL  TLIF ++ +L+++ GV+QGIE WS RLMP L  +  +   
Sbjct: 129 GMQDIALWLTSFSLERNLLFTLIFILMVVLVIRQGVQQGIEAWSKRLMPLLLAILILGVA 188

Query: 190 YIMTQQGAWEGLKHYLIPDFEKVWDRKLILAAMGQGFFSLTIGGCSMLIYGSYLSKKENL 249
           YI+TQ GA +GL   L+PDF ++W+ ++++ A+GQ FFSLT+G  +M++YG+YL+++ENL
Sbjct: 189 YILTQPGASQGLNALLVPDFGRIWEPQVLIGALGQTFFSLTVGTGAMMVYGAYLNRQENL 248

Query: 250 PKMAMSVTLVDTAVAFIAGLVVLPAMFVAMNKGVQIYAQDGSLLSSDTLVFTVLPLMFDS 309
            K+   VTL DT+VAF+A L+++PAM+VA + GVQI+A DGSLL++DTLVFTVLP +FDS
Sbjct: 249 AKLTAYVTLTDTSVAFLAALMIIPAMYVAQHNGVQIFAADGSLLNADTLVFTVLPALFDS 308

Query: 310 L-GLLGQIFAMVFFLLLTIAALTSSISMLECPVALVGERFNTRRTPTSWVLGGLIALFSV 368
           L GL GQ+ A+VFF+L+TIA LTS+IS++E P + + E+   +R   ++++GG IAL + 
Sbjct: 309 LGGLAGQLIAIVFFILMTIAGLTSAISIVEVPTSYMVEKTEIQRHSATYLVGGGIALLAT 368

Query: 369 VIVYNFGALFGLVATLATQYLQPTAALMFCLFGGWVWQRDAKMKELQAGFPELQQSLFGK 428
           ++V+NF ALF LV TL T+  QP  AL   L+ GWVW R++ +K + A        LF +
Sbjct: 369 IMVFNFDALFALVITLTTERAQPFIALGIALYTGWVWHRNSLLKAIAAQEGAKLDGLFWR 428

Query: 429 IWPWYVKFVCPVLVATVI 446
           IWP YVK+VCPVL+  +I
Sbjct: 429 IWPVYVKYVCPVLILAII 446