Pairwise Alignments

Query, 451 a.a., sodium-dependent transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., sodium-dependent symporter family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  230 bits (587), Expect = 6e-65
 Identities = 156/461 (33%), Positives = 236/461 (51%), Gaps = 35/461 (7%)

Query: 3   QSNSRETFSSRLGFILAAAGAAVGLGNIWGFPTQAASNGGGAFLLVYLILIFVVAFPMLV 62
           Q++ R+ F++RLG + A  G+AVGLGNIW FP     NGG  FLLVY+I   +V  P+++
Sbjct: 4   QTSGRDGFATRLGVLAATLGSAVGLGNIWKFPALTGQNGGATFLLVYIIATLLVGLPVMI 63

Query: 63  VEMAIGRYGQANPVDSMRSL--TSQPAAKKVGGFVGWVGLSVPSAVLAFYSIVGGWIICF 120
            E+ +GR  +AN V + R L    QP        +G  G+     ++ FY+ V GW+  +
Sbjct: 64  SEIMLGRKAKANAVRTYRELGPKGQP-----WSLIGISGVIAAVLIMGFYTDVAGWVFAY 118

Query: 121 LLGAMTDLFGFTAASAWLKGF-----SVERNLFGTLIFYVLTILIVQGGVKQGIERWSTR 175
           +  AM+     T  +   + F     S  ++L    I   L   I+ GGV  GIER +  
Sbjct: 119 IFKAMSGSIATTDPAVAKEAFVALVGSPTQSLMWQWIVLALVSAIILGGVSSGIERTTKI 178

Query: 176 LMPALFVLFAVLFIYIMTQQGAWEGLKHYLIPDFEKVWDRKLILAAMGQGFFSLTIGGCS 235
           LMP L +L  V+    +T   A EGL     PDF K+    +IL A+G  FF L+IG  +
Sbjct: 179 LMPVLLLLLCVVCARSLTLPKAAEGLAFLFTPDFSKI-TGGVILMALGLAFFKLSIGMGT 237

Query: 236 MLIYGSYLSKKENLPKMAMSVTLVDTAVAFIAGLVVLPAMFVAMNKGVQIYAQDGSLLSS 295
           M  YGSY    +N+P  A  V L D +++ +AG+ + PA+F   N G +  A        
Sbjct: 238 MTTYGSYFRDDQNIPVTAARVMLCDLSISILAGVAIFPAVF---NFGFEPSA-------G 287

Query: 296 DTLVFTVLPLMFDSLGLLGQIFAMVFFLLLTIAALTSSISMLECPVALVGERFNTRRTP- 354
            +L+F  +P +F S+   GQ+F ++FF L  IAA  + +S+ E PVA + E F   R   
Sbjct: 288 PSLLFMTIPAVFASMP-GGQLFTVIFFCLTAIAATGAMLSLFEVPVAWLVEEFKMSRAKA 346

Query: 355 ---TSWVLG--GLIALFSVVIVYNFGA----LFGLVATLATQYLQPTAALMFCLFGGWVW 405
              T+ VLG  G  A  S+ ++ +F      +F L   +++  L P   +  C+F GWVW
Sbjct: 347 TIGTALVLGVMGAPATLSMSVLGDFKMFGLNMFDLYDFVSSNILLPVGGIFICIFAGWVW 406

Query: 406 QRDAKMKELQAGFPELQQSLFGKIWPWYVKFVCPVLVATVI 446
               + +EL +    L  +     + + VK+V PVLV  V+
Sbjct: 407 -GSKRTRELLSNGGHLDNAAVVSGFLFVVKWVSPVLVTIVL 446