Pairwise Alignments

Query, 362 a.a., deacylase from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  324 bits (830), Expect = 2e-93
 Identities = 164/333 (49%), Positives = 227/333 (68%), Gaps = 1/333 (0%)

Query: 14  KKHGDFSFLGETIPPSSRRVIELEAAKLYTDSPLSIPIEVLHGASPGPVLMINAAIHGDE 73
           K+   F   G+ +   S+  I+L AAKLYTD+ L I +EV HG  PGP L++ AAIHGDE
Sbjct: 3   KRREAFEIEGKRVIAGSQMGIKLPAAKLYTDTQLDIHVEVFHGVKPGPTLLVCAAIHGDE 62

Query: 74  LNGVEIIRQLLNTLDEKKLKGTVIAVPIVNVFGFIHKSRYLPDRRDLNRCFPGSEKGSLA 133
           LNG+EI R+LL  ++ K L GT+I VPIVNVFGFI +SRYLPDRRDLNRCFPGS KG+LA
Sbjct: 63  LNGIEICRRLLGRVNPKNLAGTLIVVPIVNVFGFIQQSRYLPDRRDLNRCFPGSSKGALA 122

Query: 134 SRMAHTFFSQVAERCDYILDLHTGAIHRTNLPQIRADLSNSETLRIAQAFATPVIIDSPL 193
           SR+A+ F +Q+     +++DLHTGAIHR NLPQIR D ++   L +A AF  P+I+ S  
Sbjct: 123 SRLANLFATQLLVHATHVIDLHTGAIHRDNLPQIRCDTNDETMLAMANAFGAPLIMHSKA 182

Query: 194 RDGSLRSEAEKQQIPVLTYEAGEALRFDPIAINAGIIGIKRVMQSIGMLRPSRKKIPNSI 253
           R  S+R  A +Q IP + YEAGEALRF  +AI +G+ G+  VM+S+GML+        S+
Sbjct: 183 RSVSMRGYANQQGIPCILYEAGEALRFSELAIKSGLKGVLNVMRSLGMLKGRVSNKIASV 242

Query: 254 IAKSTSWLRAEADGILRTLVSLGDKVEKGQVLAYINSPLGKLEVEIRANKSGIVIGQQTL 313
            A  + W+R+E+DG++   + LG +V KG ++A+I SP G   V IRA   GI+IG   +
Sbjct: 243 SAIRSYWIRSESDGLVNMKLKLGQRVNKGYIIAHIVSPHGGDSVAIRAPTDGIIIGISNI 302

Query: 314 PLVNEGDAVFHLAYFHKAD-DLIEQVVEEFIEE 345
           P+ NEG+ +FH+A F   + ++  + ++EF+ E
Sbjct: 303 PVTNEGEGMFHIAQFEGDEIEIANEQLDEFLME 335