Pairwise Alignments

Query, 367 a.a., riboflavin biosynthesis protein RibD from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase (RefSeq) from Shewanella amazonensis SB2B

 Score =  348 bits (894), Expect = e-100
 Identities = 190/374 (50%), Positives = 252/374 (67%), Gaps = 17/374 (4%)

Query: 3   MFTSFDHQMMSRAIELAWRGRFTTSPNPNVGCVITRGE-QIVGEGFHFRAGEPHAEVHAM 61
           +F++ D  MM+RAI LA RG++TT PNPNVGCVI      IVGEG+H RAG PHAEVHA+
Sbjct: 6   VFSALDRAMMARAIMLAKRGQYTTRPNPNVGCVIVNDAGDIVGEGWHIRAGGPHAEVHAL 65

Query: 62  RQAGELTRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLR 121
           + A +  RGATAYVTLEPCSHYGRTPPCA+ LI  G+ +V+ AM DPNPQVAG+G+++L+
Sbjct: 66  KAAADKARGATAYVTLEPCSHYGRTPPCAKALIDNGLKRVVVAMTDPNPQVAGRGIKLLQ 125

Query: 122 DAGIEVEVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAA 181
           DAGIEV  GL+EA+AR LN GFL RME   PFV +K+ ASLDG+TAL++G+S+WIT P A
Sbjct: 126 DAGIEVAHGLMEAEARALNPGFLSRMERKRPFVTVKVGASLDGKTALSSGESKWITGPEA 185

Query: 182 RKDVQRFRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQH 241
           R+DVQR RA++ A+++   TVL D+ SL VR  +L  S+ A   E +L QP+RV+LD Q 
Sbjct: 186 RRDVQRLRAKSCALITGIDTVLLDDPSLNVRHGEL-GSLGASLTEPELIQPIRVVLDSQR 244

Query: 242 QLHPELALYQTPSPVLRVASENAE-------------LCISAENGKLDLRELLALLAQQH 288
           ++  +  L+    P+L V++E  +             L +   +G++DL  LL+ L +  
Sbjct: 245 RMSTDAKLFGITGPILLVSAEPYDEKFLHSLPDFVTCLILPGSHGRIDLAALLSHLGE-- 302

Query: 289 NVNQLWVEAGSQLAQSLIEQKLVDEIILYLAPKLMGSDGRGLFGALGLTEMAEAIELKIE 348
           N N++ VEAG  LA + I   L DE++LY APKL+GS GR +        MAE   LK+ 
Sbjct: 303 NCNRVLVEAGGTLAGAFIAAGLCDELVLYQAPKLLGSHGRDMLQLPDYQTMAEVPGLKLI 362

Query: 349 DCRMVGADLRIIAT 362
           D R VG D R   T
Sbjct: 363 DERKVGQDWRFTFT 376