Pairwise Alignments

Query, 367 a.a., riboflavin biosynthesis protein RibD from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., CMP/dCMP deaminase, zinc-binding (RefSeq) from Shewanella loihica PV-4

 Score = 51.6 bits (122), Expect = 2e-11
 Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 27/173 (15%)

Query: 6   SFDHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRA----GEPHAEVHAM 61
           ++  Q M+ A +   RG         VG ++ + + ++  G++          HAE+  +
Sbjct: 20  AYMRQAMALAAQAELRGEVP------VGALLVKDDSVIATGYNLSICRHDASAHAEMECI 73

Query: 62  RQAGELTRG-----ATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKG 116
           R AG++         T YVTLEPC+       CA  ++ A + +++    D     AG  
Sbjct: 74  RAAGQVMENYRLLDTTLYVTLEPCA------MCAGAMVHARIGRLVFGAADLKTGAAGSV 127

Query: 117 VQMLRDAG----IEVEVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQ 165
           V ++R +     +EV  G+L  D       F +R         LKMA    GQ
Sbjct: 128 VDLVRSSAFNHQLEVTAGVLAEDCGEQLSAFFRRRRQEKK--ALKMAEKKQGQ 178