Pairwise Alignments

Query, 367 a.a., riboflavin biosynthesis protein RibD from Vibrio cholerae E7946 ATCC 55056

Subject, 386 a.a., riboflavin biosynthesis protein RibD (RefSeq) from Shewanella loihica PV-4

 Score =  381 bits (978), Expect = e-110
 Identities = 197/369 (53%), Positives = 268/369 (72%), Gaps = 16/369 (4%)

Query: 4   FTSFDHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQ 63
           ++ FD QMM+RAI+LA +G++TTSPNPNVGCVI +GE +VGEGFH  AG PHAEVHA+R 
Sbjct: 7   WSKFDSQMMARAIKLARKGQYTTSPNPNVGCVIVQGETLVGEGFHIAAGGPHAEVHALRM 66

Query: 64  AGELTRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDA 123
           AG+  +GATAYVTLEPCSHYGRTPPCAE LIKA V++V+ A+ DPNPQV+G+G++ML+DA
Sbjct: 67  AGDKAKGATAYVTLEPCSHYGRTPPCAEALIKAEVSRVVVAVTDPNPQVSGRGIKMLQDA 126

Query: 124 GIEVEVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARK 183
           GI VEVGL + +A  LN GF+KRM +G+P+V +K+A SLDG+TAL+NG S+WIT P AR+
Sbjct: 127 GILVEVGLHQEEAAALNPGFMKRMRSGLPWVGIKLATSLDGKTALSNGVSKWITGPEARR 186

Query: 184 DVQRFRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQHQL 243
           DVQR RA+  A+++  +TVLAD+ SL VR  +L  S+  Q  EAD+RQPLRV+LD + +L
Sbjct: 187 DVQRMRARFDAVVTGIETVLADDPSLNVRHLEL-GSLSEQLTEADIRQPLRVVLDSRARL 245

Query: 244 HPELALYQTPSPVLRVA-------------SENAELCISAENGKLDLRELLALLAQQHNV 290
             +  L++T SPVL V+              + ++L + ++NG++ L+ LL  L  Q  +
Sbjct: 246 GAKAKLFETQSPVLLVSCQPYPEAVASAWPEQVSQLQLPSDNGQVPLKALLEHLGSQ--L 303

Query: 291 NQLWVEAGSQLAQSLIEQKLVDEIILYLAPKLMGSDGRGLFGALGLTEMAEAIELKIEDC 350
           N + VEAG+ LA + + Q L DE++LY APK++G  GR L      TEM +   LK+ D 
Sbjct: 304 NSVMVEAGATLAGAFMAQGLADELVLYQAPKILGGHGRNLLALPDYTEMTQLPALKLCDE 363

Query: 351 RMVGADLRI 359
           R +GAD R+
Sbjct: 364 RAIGADRRL 372