Pairwise Alignments

Query, 367 a.a., riboflavin biosynthesis protein RibD from Vibrio cholerae E7946 ATCC 55056

Subject, 377 a.a., riboflavin biosynthesis protein RibD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  201 bits (510), Expect = 3e-56
 Identities = 137/388 (35%), Positives = 193/388 (49%), Gaps = 42/388 (10%)

Query: 2   PMFTSFDHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAM 61
           P FT F    M  AI LA RGR+  +PNP VG V+ R  ++   G+H   G+PHAEV  +
Sbjct: 3   PDFTPF----MREAIALAERGRWYAAPNPTVGAVLVRDGEVAARGWHTGYGKPHAEVECL 58

Query: 62  RQA---GELTRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQ 118
           R A   G      T  VTLEPC+H+G+TPPC+  +++AG+ +V+  + DPNP VA  G +
Sbjct: 59  RDAASKGVDPAHCTLVVTLEPCNHHGKTPPCSHAIVEAGITRVVVGLADPNP-VASGGAE 117

Query: 119 MLRDAGIEVEVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITS 178
            LR  G+ V++G+ E +   L   FL    T +P+V LK+A++LDG+ A  +G SQWI+ 
Sbjct: 118 YLRAHGVTVDMGVCEQECHDLVADFLTWKLTDLPYVILKLASTLDGRIATRSGHSQWISG 177

Query: 179 PAARKDVQRFRAQ----ASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLR 234
             AR  V   RA+      A+L    T+  D+  L  R   LP            RQP+ 
Sbjct: 178 AEARAAVHELRARIGEAGGAVLVGGTTLYTDDPQLTARVAPLPR-----------RQPMA 226

Query: 235 VILDRQHQLHPELALYQTPSPVLRV--------------ASENAELCISA----ENGKLD 276
           V+  R    H  L       P   V              A   + +CI A     +G+LD
Sbjct: 227 VVATRHVPHHDALPRIFRERPGQCVVWTDSTGAGTEAADALRTSGVCIMALPLTPSGRLD 286

Query: 277 LRELLALLAQQHNVNQLWVEAGSQLAQSLIEQKLVDEIILYLAPKLMG-SDGRGLFGALG 335
           LR  L  L   H V  +  E G +LA SL+E  LV E  L++APK++G ++   LF    
Sbjct: 287 LRAGLTRLRADHGVEHVLCEGGGKLALSLLEAGLVGEFHLHMAPKIIGDAEAALLFDGRA 346

Query: 336 LTEMAEAIELKIEDCRMVGADLRIIATP 363
              M EA+ L++      G D  +I  P
Sbjct: 347 PLHMDEALRLRMTGIERRGDDCIMILRP 374