Pairwise Alignments

Query, 367 a.a., riboflavin biosynthesis protein RibD from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., riboflavin biosynthesis protein RibD (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  211 bits (537), Expect = 2e-59
 Identities = 135/358 (37%), Positives = 194/358 (54%), Gaps = 7/358 (1%)

Query: 6   SFDHQMMSRAIELAWRGRFTTSPNPNVGCVITRGE-QIVGEGFHFRAGEPHAEVHAMRQA 64
           S D + M  A+ L  RG   + PNP VGCV+     ++VG G     G PHAEV A+ QA
Sbjct: 2   SDDLRWMQVALTLGRRGLGQSWPNPAVGCVLVAPNGRVVGRGRTQSGGRPHAEVVALAQA 61

Query: 65  GELTRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAG 124
           G   RGATAYVTLEPC+H+G+T PC + LI AGV +V+ A++DP+P+VAG+G   LR AG
Sbjct: 62  GAAARGATAYVTLEPCAHHGQTGPCCDALIAAGVGRVVTALEDPDPRVAGQGHSRLRAAG 121

Query: 125 IEVEVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARKD 184
           + V  G+  A AR    GFL R+  G P V LK+A +LDG+ A A G+SQWIT   AR+ 
Sbjct: 122 VAVTEGVGRAAAREDQLGFLNRVTLGRPMVTLKLALTLDGRIATARGESQWITGAEARRY 181

Query: 185 VQRFRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQHQLH 244
               RA+  A+L  + T   D+ +L VR   +        A  DL  P+   L +     
Sbjct: 182 GHALRARHDAVLIGAGTARTDDPTLTVRGVGVVRQPVRVVASRDLDVPIPSRLSQSVTAD 241

Query: 245 -PELALYQTPSPVLRVASENAE----LCISAENGKLDLRELLALLAQQHNVNQLWVEAGS 299
            P    +   +P  R+A   A     + ++AE   + +  LL  LAQ+  + +++ E G 
Sbjct: 242 APVWLCHGGEAPAERIARARAAGLKCVEVAAEAEGVSVESLLRTLAQR-GLTRVYCEGGG 300

Query: 300 QLAQSLIEQKLVDEIILYLAPKLMGSDGRGLFGALGLTEMAEAIELKIEDCRMVGADL 357
             A  L+    VD + ++ A  ++G+DG    G LG+  +A+A   +    R VG D+
Sbjct: 301 AFAAGLLRAGCVDRLAVFSAGCVIGADGLPGLGDLGVNLLADAPRFRRLGVRQVGGDV 358