Pairwise Alignments

Query, 367 a.a., riboflavin biosynthesis protein RibD from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., riboflavin biosynthesis protein ribD (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  195 bits (496), Expect = 1e-54
 Identities = 123/323 (38%), Positives = 168/323 (52%), Gaps = 23/323 (7%)

Query: 12  MSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGE--LTR 69
           M R IELA  G    +PNP VG VI     I+GEG+H R GE HAEV+A+R   +  L  
Sbjct: 1   MRRCIELAKNGLCNVAPNPMVGAVIVCDGLIIGEGYHIRCGEAHAEVNAIRSVKDKSLLS 60

Query: 70  GATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEV 129
            +T YV+LEPCSHYG+TPPCA+ +I+  + +++   QDP  QVAG+G+Q LRDAG EV V
Sbjct: 61  RSTIYVSLEPCSHYGKTPPCADLIIEKQIPRIVIGCQDPFSQVAGRGIQKLRDAGREVTV 120

Query: 130 GLLEADARVLNRGFLKRMETGMPFVQLKMAASLDG--QTALANGKSQWITSPAARKDVQR 187
           G+LE + R L R F+       PF+ LK A S D        +G    ++SP     V +
Sbjct: 121 GVLEKECRYLIRRFITFNTLHRPFITLKWAESADHFIDVERTDGNPVVLSSPLTSMLVHK 180

Query: 188 FRAQASAILSTSQTVLADNASLAVR-WYDLPSSVQAQYAEADLRQPLRVILDRQHQLHPE 246
            RA+  AI+   +T L DN SL VR WY               R P+R++LDR   L   
Sbjct: 181 KRAETDAIMVGRRTALLDNPSLTVRNWYG--------------RNPVRIVLDRALSLPHS 226

Query: 247 LALYQTPSPVLRVASE----NAELCISAENGKLDLRELLALLAQQHNVNQLWVEAGSQLA 302
           L L+    P +   +E       +         D+   +  +  Q  +  L VE GSQL 
Sbjct: 227 LRLFDGEVPTIVFTAEKHPDKKNVTYRTIEFTQDILPQIMKVLYQQKIQSLLVEGGSQLL 286

Query: 303 QSLIEQKLVDEIILYLAPKLMGS 325
           QS I+ +L DE+ +   P  + S
Sbjct: 287 QSFIDAELWDEVYIEKCPCKLNS 309