Pairwise Alignments

Query, 367 a.a., riboflavin biosynthesis protein RibD from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase (RefSeq) from Shewanella sp. ANA-3

 Score =  364 bits (935), Expect = e-105
 Identities = 196/368 (53%), Positives = 260/368 (70%), Gaps = 16/368 (4%)

Query: 4   FTSFDHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQ 63
           ++  D+QMMSRAI+LA +G +TT PNP+VGCVI +  QIVGEG+H +AGEPHAEVHA+R 
Sbjct: 3   WSELDNQMMSRAIQLARKGFYTTRPNPSVGCVIVKDNQIVGEGYHQKAGEPHAEVHALRM 62

Query: 64  AGELTRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDA 123
           AGEL RGATAYVTLEPCSHYGRTPPCA  LI  GV +V+ A++DPNPQV G+G+QMLRDA
Sbjct: 63  AGELARGATAYVTLEPCSHYGRTPPCALALINIGVKRVVVAVEDPNPQVGGRGIQMLRDA 122

Query: 124 GIEVEVGLLEADARVLNRGFLKRMETGMPFVQLKMAASLDGQTALANGKSQWITSPAARK 183
           GIEV+VGL   +A  LN GF+KRME+G+P+V +K+AASLDG+TAL+NG S+WIT P AR+
Sbjct: 123 GIEVDVGLHRDEAYALNLGFMKRMESGLPWVTVKLAASLDGKTALSNGVSKWITGPEARR 182

Query: 184 DVQRFRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQHQL 243
           DVQR R +A A+++  +TVLAD  SL VR+ +L  S+  Q +EA + QPLRVILD + ++
Sbjct: 183 DVQRLRLRACALVTGIETVLADAPSLNVRYSEL-GSLNLQLSEAQILQPLRVILDSRCRM 241

Query: 244 HPELALYQTPSPVLRVASENAE-------------LCISAENGKLDLRELLALLAQQHNV 290
               AL    SP+L V++E                L + A +G++ L  LL+ L +  + 
Sbjct: 242 PITAALLAIESPILLVSTEPYSPAFMAQLPAHVTCLQLPAIDGRISLPALLSYLGK--SC 299

Query: 291 NQLWVEAGSQLAQSLIEQKLVDEIILYLAPKLMGSDGRGLFGALGLTEMAEAIELKIEDC 350
           NQ+ +EAG+ LA + I   L DE++LY A K++G+ GR L        MA+   LK+ D 
Sbjct: 300 NQVLIEAGATLAGAFIGDGLADELVLYQAMKILGAQGRNLLELPDYQMMADIPTLKLVDE 359

Query: 351 RMVGADLR 358
           R VGAD+R
Sbjct: 360 RKVGADMR 367