Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 165 a.a., Antitermination protein NusB from Pseudomonas syringae pv. syringae B728a

 Score =  126 bits (316), Expect = 2e-34
 Identities = 68/152 (44%), Positives = 92/152 (60%), Gaps = 14/152 (9%)

Query: 3   ASVKPAARRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPETD 62
           A  K A RR ARQ A QA+Y   +    +  IE QF     +                 D
Sbjct: 20  AKGKSAKRREARQMATQALYQRHMAGHALNEIEAQFRVDNDFSN--------------VD 65

Query: 63  VSYFRDLLAGVVLNHNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVI 122
            +YFR+LL GV  N  E+D+ L+P +   +++LD +ELA+LRL+ +E+ +R DVPY+VVI
Sbjct: 66  GTYFRELLHGVATNQTEIDTALKPCLDLTIEELDPIELAILRLSTFELLKRIDVPYRVVI 125

Query: 123 NEAIELAKVFAAEDSHKFVNGVLDKAAPHVRK 154
           NE IELAKV+ + D HKFVNGVLDK AP +R+
Sbjct: 126 NEGIELAKVYGSTDGHKFVNGVLDKLAPRLRE 157