Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 134 a.a., transcription antitermination protein NusB (RefSeq) from Shewanella amazonensis SB2B

 Score =  151 bits (382), Expect = 3e-42
 Identities = 76/143 (53%), Positives = 100/143 (69%), Gaps = 14/143 (9%)

Query: 5   VKPAARRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPETDVS 64
           +KP+ RR AR+ A+QAIYSWQ++  NVA +E +FLT  + D                DV+
Sbjct: 1   MKPSERRKARRLAVQAIYSWQLSGNNVADVEHEFLTEQELDG--------------VDVA 46

Query: 65  YFRDLLAGVVLNHNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVINE 124
           YFR+L AG      +LD KL+P + RP++++  +E A+LRLA+YE+T R+DVPYKVVINE
Sbjct: 47  YFRELFAGAATKTAQLDEKLKPLLDRPLEEVSPVEKAILRLAVYELTFRKDVPYKVVINE 106

Query: 125 AIELAKVFAAEDSHKFVNGVLDK 147
           AIELAK F AED HKFVNG+LDK
Sbjct: 107 AIELAKSFGAEDGHKFVNGILDK 129