Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 174 a.a., transcription antitermination factor NusB from Rhodopseudomonas palustris CGA009

 Score = 72.0 bits (175), Expect = 5e-18
 Identities = 47/151 (31%), Positives = 78/151 (51%), Gaps = 8/151 (5%)

Query: 6   KPAARRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPETDVSY 65
           K   R  AR  A+QA+Y   I    +     +F +    +E E     PA AA      +
Sbjct: 24  KANRRGAARLAAVQALYQMDIGGAGINETFAEFESFWIGNEVEGEQYLPAEAA------F 77

Query: 66  FRDLLAGVVLNHNELDSKLRPFVSR--PMQDLDMMELALLRLAMYEMTRREDVPYKVVIN 123
           FRD++AGVV    ++D  +   ++R  P+  +D +  A++R   YE+  R+D+P +VV++
Sbjct: 78  FRDIVAGVVREQKQIDPLIDDLLARGWPLARIDAILRAVMRAGAYELEHRKDIPARVVVS 137

Query: 124 EAIELAKVFAAEDSHKFVNGVLDKAAPHVRK 154
           E +++A  F  +D    VN VLD+ A   R+
Sbjct: 138 EYVDVAHAFVEKDETGMVNAVLDQIARRFRE 168