Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 160 a.a., transcription antitermination factor NusB from Dechlorosoma suillum PS

 Score = 99.4 bits (246), Expect = 2e-26
 Identities = 56/152 (36%), Positives = 80/152 (52%), Gaps = 18/152 (11%)

Query: 6   KPAA----RRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPET 61
           KPAA    RR +R+FALQ +Y W+I  ++ A IE        +D+               
Sbjct: 10  KPAAAKSPRRRSREFALQGLYQWRIGGQDEAAIEAHMADVSGFDK--------------A 55

Query: 62  DVSYFRDLLAGVVLNHNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVV 121
           D  +F  L+ G +     L ++L PF+ R   ++  +E  +L L   E+T   + PYKV+
Sbjct: 56  DREFFVGLVRGALAQREALVAELTPFLDRGFDEMSPIEACILLLGALELTHHPETPYKVI 115

Query: 122 INEAIELAKVFAAEDSHKFVNGVLDKAAPHVR 153
           INE IELAK +   D HK+VNGVLDK A  +R
Sbjct: 116 INECIELAKGYGGTDGHKYVNGVLDKLAGKLR 147