Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 165 a.a., NusB antitermination factor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 73.9 bits (180), Expect = 1e-18
 Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 9/150 (6%)

Query: 6   KPAARRNARQFALQAIYSWQITKE-NVATIEEQFLTS----GKYDEEEHRAAEPALAAPE 60
           K   RR+ R  A Q +Y    T   +   +   +  S     +  E+E    +    AP+
Sbjct: 6   KKPTRRSERALAFQVLYGLSFTPATSEGALRAAYAASPDVADRNAEDEKADRQAPATAPQ 65

Query: 61  TDVSYFRDLLAGVVLNHNELDSKLRPFVSR-PMQDLDMMELALLRLAMYEMTRREDVPYK 119
               Y  +++ GV     ELD  +  F     ++ +  +EL LLR+A+YEM  R+DVP K
Sbjct: 66  ---GYAWEVIHGVWKTQAELDEAVSGFSQNWRVERMGRVELTLLRIAVYEMLFRDDVPAK 122

Query: 120 VVINEAIELAKVFAAEDSHKFVNGVLDKAA 149
           V +NEAIEL+K F  ++S  F+NG+LD  A
Sbjct: 123 VAMNEAIELSKQFGDDNSRGFINGILDAVA 152