Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 153 a.a., NusB antitermination factor from Sphingomonas koreensis DSMZ 15582

 Score = 59.3 bits (142), Expect = 3e-14
 Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 12/155 (7%)

Query: 3   ASVKPAARRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAP--E 60
           A  +  AR  AR  A+QA+Y  ++ K  +  +  +F         +HR       A   +
Sbjct: 6   AKSRSKARAAARLAAVQALYQQEMEKTPLPQLLTEF--------HQHRLGATIEEAEYID 57

Query: 61  TDVSYFRDLLAGVVLNHNELDSKLRPFVSRP--MQDLDMMELALLRLAMYEMTRREDVPY 118
            DV +F D++ GV    +E+D+ +   +S       LD     +LR   YE+  R DVP 
Sbjct: 58  ADVMFFDDIVKGVDARRDEIDALIASKLSSDWSFDRLDRPMRQILRAGTYELLARNDVPT 117

Query: 119 KVVINEAIELAKVFAAEDSHKFVNGVLDKAAPHVR 153
              I+E +++   F       FVNG+LD  A  VR
Sbjct: 118 GAAISEYLDVTDAFYDRREKGFVNGLLDAIAKAVR 152